====================================================================== Power spectra and sensitivity measure in microcircuit model (Bos 2016) ====================================================================== These examples reproduce results by :cite:t:`bos2016`. - :doc:`power_spectra.py `: plots the power spectra predicted by mean-field theory and compares it with simulation results (Fig 1E in :cite:t:`bos2016`) .. image:: ../../examples/bos2016/figures/power_spectra_Bos2016.png :width: 400 :alt: Power Spectra of the Microcircuit Model (Fig. 1E in :cite:t:`bos2016`) - :doc:`eigenvalue_trajectories.py `: calculates the eigenvalues of the effective connectivity matrix across all analysis frequencies for the whole circuit and for the isolated layers (Fig. 4 in :cite:t:`bos2016`) .. image:: ../../examples/bos2016/figures/eigenvalue_trajectories_Bos2016.png :width: 400 :alt: Eigenvalue Trajectories (Fig. 4 in :cite:t:`bos2016`) - :doc:`sensitivity_measure.py `: computes the sensitivity measure for each eigenmode to reveal the anatomical origin of peaks in the power spectra (Fig. 6 in :cite:t:`bos2016`) .. image:: ../../examples/bos2016/figures/sensitivity_measure_high_gamma_Bos2016.png :width: 400 :alt: Sensitivity Measure - High-$\gamma$ frequencies (Fig. 6 in :cite:t:`bos2016`) - :doc:`power_spectra_of_subcircuits.py `: confirms the results of the sensitivity measure for the low-$\gamma$ oscillations by plotting the power spectra of the relevant subcircuits (Fig. 9 in :cite:t:`bos2016`) .. image:: ../../examples/bos2016/figures/power_spectra_of_subcircuits_Bos2016.png :width: 400 :alt: Power Spectra of Subcircuits (Fig. 9 in :cite:t:`bos2016`) All Python scripts use the parameter files :download:`Bos2016_network_params.yaml <../../tests/fixtures/integration/config/Bos2016_network_params.yaml>` and :download:`Bos2016_analysis_params.yaml <../../tests/fixtures/integration/config/Bos2016_network_params.yaml>`.